CDS

Accession Number TCMCG057C24243
gbkey CDS
Protein Id XP_018490733.1
Location complement(join(10230319..10230504,10230591..10230734,10230816..10230942,10231054..10231133,10231229..10231480,10231577..10231705,10231824..10231873,10232000..10232102,10232197..10232310,10232500..10232561,10232644..10232680,10232768..10232823,10232954..10233011,10233088..10233156,10233220..10233299,10233384..10233468))
Gene LOC108861380
GeneID 108861380
Organism Raphanus sativus

Protein

Length 543aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018635231.1
Definition PREDICTED: EH domain-containing protein 1 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category TU
Description Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K12483        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005769        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0005929        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006972        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010830        [VIEW IN EMBL-EBI]
GO:0010831        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0020016        [VIEW IN EMBL-EBI]
GO:0020018        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030030        [VIEW IN EMBL-EBI]
GO:0030031        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030182        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031175        [VIEW IN EMBL-EBI]
GO:0031253        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031901        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032386        [VIEW IN EMBL-EBI]
GO:0032388        [VIEW IN EMBL-EBI]
GO:0032456        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042538        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044441        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044782        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045597        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048666        [VIEW IN EMBL-EBI]
GO:0048699        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051147        [VIEW IN EMBL-EBI]
GO:0051149        [VIEW IN EMBL-EBI]
GO:0051153        [VIEW IN EMBL-EBI]
GO:0051155        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0051260        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055037        [VIEW IN EMBL-EBI]
GO:0055038        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060142        [VIEW IN EMBL-EBI]
GO:0060143        [VIEW IN EMBL-EBI]
GO:0060170        [VIEW IN EMBL-EBI]
GO:0060271        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0061512        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070848        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071363        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098590        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120031        [VIEW IN EMBL-EBI]
GO:0120036        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]
GO:1901739        [VIEW IN EMBL-EBI]
GO:1901741        [VIEW IN EMBL-EBI]
GO:1990089        [VIEW IN EMBL-EBI]
GO:1990090        [VIEW IN EMBL-EBI]
GO:2001135        [VIEW IN EMBL-EBI]
GO:2001137        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGATCGATTCCGTCGCAGCTGGTTCTTGCTCCAAGGCGAATCAAATCATCTACAAGGACTGGTTCGAATTCGCCGATTCAGACGGAGATGGACGCATTACTGGTGGCGATGCGATCAAGTTCTTCTCCATGTCCAATTTGCCTCGACCTGAGCTGAAGCAGGTGTGGGCAATTGCAGATGCTAAGAGGCAAGGGTATCTTGGTTTCAAAGAGTTCATCGTTGCTATGCAGCTTGTTTCTTTGGCTCAAACTGGACATGAGATATCTCATGAAGTTCTTCATAGCGACGTTGATTTCAAAAATATGAATCCTCCTGTTATGGATGGTCTCATTGTATTAATGGCGAAGAAGAAGCATTCACCGAAGTCGAGTGATCCGACTGGTACTCCTGCTGCAGATCCATCGCTTACATCTCATTGGTTCTCTTCAAAATCTTCAAAAAAGATATCTCTGTCCTCCGTAACATCTATAGTTGATGGCTTGAAGAGGTTGTACATTCAAAAGCTAAAGCCACTTGAAGTTGCTTATCAGTTTAACGATTTTGTATCCCCTGTGTTGACGAACAGTGATTTTGATGCAAAACCTATGGTAATGCTTCTGGGTCAGTACTCCACAGGGAAAACAACGTTCATTAAGCATATGCTTAAATCAAATTATCCAGGAGCTCATATCGGACCGGAACCAACTACTGACAGATTTGTTGTTGTCATGTCTGGACCTGATGAAAGAAGCATTCCAGGGAACACAGTAGCGGTTCAAGCAGATATGCCATTCAATGGTCTTACAACTTTTGGGACTGCCTTTTTGTCAAAGTTTGAATGTTCTCAGATGCCTCATCCTCTGCTGGAGCACGTAACATTTGTTGACACTCCCGGAGTTTTATCAGGAGAAAAGCAACGGACACAGCGAGCATATGAATTCACTGGTGTTACGTCATGGTTTGCCTCGAAGTGCGATCTCATCCTCCTCCTGTTCGATCCACACAAGCTGGATGTAAGCGATGAGTTCAAGCGGGTTATTTCATCTTTACGCGGCCATGATGACAAGATCCGCGTTGTTTTGAATAAGGCTGACCAAGTGGACACTCAACAGCTAATGAGGGTGTATGGAGCTCTCATGTGGTCACTTGGGAAAGTTCTCAATACTCCTGAGGTTGTCCGTGTCTACATTGGCTCCTTCAGTGATAAGCCCATAAATGAAGCTGCGACTGGTCCAACTGGGAGAGAATTGTTTGAAATGGAGCAAGATGACCTTCTCTCTGATTTGAAAAACATTCCAAAGAAAGCTTGTGATCGTCGAATAAATGAGTTTGTGAAACGGGCAAGAGCTGCAAAGATACATGCGTACATCATCAGCCATTTAAAGAAAGAGATGCCAGCCATAATGGGAAAAGCCAAAACTCAACAGAGACTGATGGATAACTTGGAAGAAGTCTTTGGAAAGGTACAAAGAGAGCATCATTTACCAAAAGGAGATTTCCCAAACGTGGACCATTTTAGGGAGGTGCTAAGTGGTTACAACTTCGACAAGTTTGAGAAGCTAAAGCCAAAAATGTTGCAGACTGTTGATGATATGTTGGGGTATAACATTCCGGAGCTCTTGAAAAATTTCAAAAACCCTTATGATTAA
Protein:  
MEIDSVAAGSCSKANQIIYKDWFEFADSDGDGRITGGDAIKFFSMSNLPRPELKQVWAIADAKRQGYLGFKEFIVAMQLVSLAQTGHEISHEVLHSDVDFKNMNPPVMDGLIVLMAKKKHSPKSSDPTGTPAADPSLTSHWFSSKSSKKISLSSVTSIVDGLKRLYIQKLKPLEVAYQFNDFVSPVLTNSDFDAKPMVMLLGQYSTGKTTFIKHMLKSNYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHVTFVDTPGVLSGEKQRTQRAYEFTGVTSWFASKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFSDKPINEAATGPTGRELFEMEQDDLLSDLKNIPKKACDRRINEFVKRARAAKIHAYIISHLKKEMPAIMGKAKTQQRLMDNLEEVFGKVQREHHLPKGDFPNVDHFREVLSGYNFDKFEKLKPKMLQTVDDMLGYNIPELLKNFKNPYD